Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox6P40645 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.03□□□□□ -0.16
Sox6P40645 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox6P40645 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox6P40645 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.03□□□□□ -0.16
Sox6P40645 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Sox6P40645 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.02□□□□□ -0.16
Sox6P40645 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Sox6P40645 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox6P40645 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.02□□□□□ -0.17
Sox6P40645 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox6P40645 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Mir8098-201ENSMUST00000184011 137 ntBASIC14.02□□□□□ -0.17
Sox6P40645 Gm28659-201ENSMUST00000188013 759 ntBASIC14.02□□□□□ -0.17
Sox6P40645 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox6P40645 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.02□□□□□ -0.17
Sox6P40645 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.02□□□□□ -0.17
Sox6P40645 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Sox6P40645 Rps4l-201ENSMUST00000071745 943 ntBASIC14.02□□□□□ -0.17
Sox6P40645 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Sox6P40645 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox6P40645 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Efs-202ENSMUST00000227037 2540 ntBASIC14.02□□□□□ -0.17
Sox6P40645 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox6P40645 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sox6P40645 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.01□□□□□ -0.17
Sox6P40645 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Gm8344-201ENSMUST00000119813 856 ntBASIC14.01□□□□□ -0.17
Sox6P40645 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Gm4535-201ENSMUST00000182274 558 ntBASIC14.01□□□□□ -0.17
Sox6P40645 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.01□□□□□ -0.17
Sox6P40645 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.01□□□□□ -0.17
Sox6P40645 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Gm10355-201ENSMUST00000097146 517 ntBASIC14.01□□□□□ -0.17
Sox6P40645 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox6P40645 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.01□□□□□ -0.17
Sox6P40645 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox6P40645 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14□□□□□ -0.17
Sox6P40645 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sox6P40645 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox6P40645 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms