Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.46□□□□□ -0.09
TfamP40630 Gm25990-201ENSMUST00000102440 86 ntBASIC14.46□□□□□ -0.09
TfamP40630 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.46□□□□□ -0.09
TfamP40630 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.46□□□□□ -0.09
TfamP40630 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.46□□□□□ -0.09
TfamP40630 Gm27459-201ENSMUST00000184860 107 ntBASIC14.46□□□□□ -0.09
TfamP40630 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.46□□□□□ -0.09
TfamP40630 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.46□□□□□ -0.09
TfamP40630 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.46□□□□□ -0.09
TfamP40630 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TfamP40630 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TfamP40630 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TfamP40630 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TfamP40630 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TfamP40630 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TfamP40630 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TfamP40630 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TfamP40630 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TfamP40630 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.45□□□□□ -0.1
TfamP40630 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TfamP40630 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.45□□□□□ -0.1
TfamP40630 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.45□□□□□ -0.1
TfamP40630 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TfamP40630 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TfamP40630 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.44□□□□□ -0.1
TfamP40630 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.44□□□□□ -0.1
TfamP40630 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.44□□□□□ -0.1
TfamP40630 Gm5682-201ENSMUST00000173402 505 ntBASIC14.44□□□□□ -0.1
TfamP40630 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.44□□□□□ -0.1
TfamP40630 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TfamP40630 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Gm37153-201ENSMUST00000193637 231 ntBASIC14.44□□□□□ -0.1
TfamP40630 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.44□□□□□ -0.1
TfamP40630 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.44□□□□□ -0.1
TfamP40630 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.44□□□□□ -0.1
TfamP40630 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.44□□□□□ -0.1
TfamP40630 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TfamP40630 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TfamP40630 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.44□□□□□ -0.1
TfamP40630 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.43□□□□□ -0.1
TfamP40630 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TfamP40630 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.43□□□□□ -0.1
TfamP40630 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms