Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Gm17968-201ENSMUST00000194902 784 ntBASIC14.68□□□□□ -0.06
Cd9P40240 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.68□□□□□ -0.06
Cd9P40240 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
Cd9P40240 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.68□□□□□ -0.06
Cd9P40240 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd9P40240 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.67□□□□□ -0.06
Cd9P40240 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.67□□□□□ -0.06
Cd9P40240 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cd9P40240 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cd9P40240 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cd9P40240 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cd9P40240 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Mir8117-201ENSMUST00000184773 107 ntBASIC14.67□□□□□ -0.06
Cd9P40240 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.67□□□□□ -0.06
Cd9P40240 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cd9P40240 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Gm7461-201ENSMUST00000058918 827 ntBASIC14.67□□□□□ -0.06
Cd9P40240 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cd9P40240 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cd9P40240 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cd9P40240 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd9P40240 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cd9P40240 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.66□□□□□ -0.06
Cd9P40240 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd9P40240 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.66□□□□□ -0.06
Cd9P40240 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.66□□□□□ -0.06
Cd9P40240 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd9P40240 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.66□□□□□ -0.06
Cd9P40240 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.65□□□□□ -0.06
Cd9P40240 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd9P40240 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms