Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Timp3P39876 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Timp3P39876 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.25□□□□□ -0.45
Timp3P39876 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.25□□□□□ -0.45
Timp3P39876 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Timp3P39876 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Timp3P39876 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.25□□□□□ -0.45
Timp3P39876 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.25□□□□□ -0.45
Timp3P39876 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.25□□□□□ -0.45
Timp3P39876 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Timp3P39876 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.24□□□□□ -0.45
Timp3P39876 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Timp3P39876 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Timp3P39876 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.24□□□□□ -0.45
Timp3P39876 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.24□□□□□ -0.45
Timp3P39876 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.24□□□□□ -0.45
Timp3P39876 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.24□□□□□ -0.45
Timp3P39876 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.24□□□□□ -0.45
Timp3P39876 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Gm27301-201ENSMUST00000184012 127 ntBASIC12.24□□□□□ -0.45
Timp3P39876 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.24□□□□□ -0.45
Timp3P39876 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.24□□□□□ -0.45
Timp3P39876 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Timp3P39876 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Timp3P39876 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Timp3P39876 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Timp3P39876 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Timp3P39876 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Timp3P39876 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Timp3P39876 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms