Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh4P39038 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh4P39038 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.28□□□□□ -0.12
Cdh4P39038 Gm27301-201ENSMUST00000184012 127 ntBASIC14.28□□□□□ -0.12
Cdh4P39038 Gm17968-201ENSMUST00000194902 784 ntBASIC14.28□□□□□ -0.12
Cdh4P39038 Gm44492-201ENSMUST00000197012 141 ntBASIC14.28□□□□□ -0.12
Cdh4P39038 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.28□□□□□ -0.12
Cdh4P39038 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.28□□□□□ -0.12
Cdh4P39038 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh4P39038 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh4P39038 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Cdh4P39038 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Cdh4P39038 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdh4P39038 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdh4P39038 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdh4P39038 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdh4P39038 Gm2213-201ENSMUST00000197485 688 ntBASIC14.27□□□□□ -0.13
Cdh4P39038 Gm43767-201ENSMUST00000198933 381 ntBASIC14.27□□□□□ -0.13
Cdh4P39038 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.27□□□□□ -0.13
Cdh4P39038 Gm45747-201ENSMUST00000212203 999 ntBASIC14.27□□□□□ -0.13
Cdh4P39038 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Gm10175-201ENSMUST00000086013 645 ntBASIC14.27□□□□□ -0.13
Cdh4P39038 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cdh4P39038 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Cdh4P39038 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdh4P39038 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 BC037039-201ENSMUST00000192003 2205 ntBASIC14.26□□□□□ -0.13
Cdh4P39038 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdh4P39038 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.26□□□□□ -0.13
Cdh4P39038 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdh4P39038 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdh4P39038 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Cdh4P39038 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.25□□□□□ -0.13
Cdh4P39038 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cdh4P39038 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms