Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rab5cP35278 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab5cP35278 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab5cP35278 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.17□□□□□ -0.46
Rab5cP35278 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.17□□□□□ -0.46
Rab5cP35278 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Rab5cP35278 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.17□□□□□ -0.46
Rab5cP35278 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Rab5cP35278 Timm23-208ENSMUST00000226683 750 ntBASIC12.17□□□□□ -0.46
Rab5cP35278 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab5cP35278 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rab5cP35278 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab5cP35278 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.16□□□□□ -0.46
Rab5cP35278 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rab5cP35278 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rab5cP35278 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.16□□□□□ -0.46
Rab5cP35278 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.16□□□□□ -0.46
Rab5cP35278 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.16□□□□□ -0.46
Rab5cP35278 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.16□□□□□ -0.46
Rab5cP35278 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.16□□□□□ -0.46
Rab5cP35278 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rab5cP35278 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.16□□□□□ -0.46
Rab5cP35278 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rab5cP35278 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rab5cP35278 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rab5cP35278 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab5cP35278 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rab5cP35278 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Carlr-201ENSMUST00000181515 2574 ntBASIC12.15□□□□□ -0.46
Rab5cP35278 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.15□□□□□ -0.46
Rab5cP35278 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab5cP35278 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab5cP35278 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.15□□□□□ -0.46
Rab5cP35278 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms