Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm6222-201ENSMUST00000120787 396 ntBASIC17.08■□□□□ 0.32
Vcam1P29533 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.08■□□□□ 0.32
Vcam1P29533 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Gm27631-201ENSMUST00000184163 466 ntBASIC17.08■□□□□ 0.32
Vcam1P29533 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Dupd1-202ENSMUST00000224735 548 ntBASIC17.08■□□□□ 0.32
Vcam1P29533 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vcam1P29533 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
Vcam1P29533 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.07■□□□□ 0.32
Vcam1P29533 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.07■□□□□ 0.32
Vcam1P29533 Mir1897-201ENSMUST00000122581 272 ntBASIC17.07■□□□□ 0.32
Vcam1P29533 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.07■□□□□ 0.32
Vcam1P29533 Gm9726-201ENSMUST00000180321 678 ntBASIC17.07■□□□□ 0.32
Vcam1P29533 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.07■□□□□ 0.32
Vcam1P29533 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.07■□□□□ 0.32
Vcam1P29533 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcam1P29533 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Vcam1P29533 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Vcam1P29533 Gm43703-201ENSMUST00000200523 763 ntBASIC17.06■□□□□ 0.32
Vcam1P29533 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vcam1P29533 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.06■□□□□ 0.32
Vcam1P29533 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcam1P29533 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.05■□□□□ 0.32
Vcam1P29533 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Syt7-204ENSMUST00000223586 1344 ntBASIC17.05■□□□□ 0.32
Vcam1P29533 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.05■□□□□ 0.32
Vcam1P29533 Gm7730-201ENSMUST00000212486 454 ntBASIC17.05■□□□□ 0.32
Vcam1P29533 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vcam1P29533 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcam1P29533 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Vcam1P29533 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vcam1P29533 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms