Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm2213-201ENSMUST00000197485 688 ntBASIC13.78□□□□□ -0.2
Cd40lgP27548 AW822252-206ENSMUST00000208904 237 ntBASIC13.78□□□□□ -0.2
Cd40lgP27548 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.78□□□□□ -0.2
Cd40lgP27548 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.78□□□□□ -0.2
Cd40lgP27548 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.78□□□□□ -0.2
Cd40lgP27548 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd40lgP27548 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cd40lgP27548 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cd40lgP27548 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cd40lgP27548 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cd40lgP27548 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cd40lgP27548 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Cd40lgP27548 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.77□□□□□ -0.21
Cd40lgP27548 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.77□□□□□ -0.21
Cd40lgP27548 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.77□□□□□ -0.21
Cd40lgP27548 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd40lgP27548 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Cd40lgP27548 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.76□□□□□ -0.21
Cd40lgP27548 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Cd40lgP27548 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Gm15467-201ENSMUST00000120582 445 ntBASIC13.76□□□□□ -0.21
Cd40lgP27548 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.76□□□□□ -0.21
Cd40lgP27548 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.76□□□□□ -0.21
Cd40lgP27548 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cd40lgP27548 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.76□□□□□ -0.21
Cd40lgP27548 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms