Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40P27512 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cd40P27512 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40P27512 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.48□□□□□ -0.25
Cd40P27512 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.48□□□□□ -0.25
Cd40P27512 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Gm5264-201ENSMUST00000190584 848 ntBASIC13.48□□□□□ -0.25
Cd40P27512 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.48□□□□□ -0.25
Cd40P27512 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.48□□□□□ -0.25
Cd40P27512 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.48□□□□□ -0.25
Cd40P27512 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40P27512 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cd40P27512 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.48□□□□□ -0.25
Cd40P27512 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40P27512 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cd40P27512 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.47□□□□□ -0.25
Cd40P27512 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cd40P27512 Gm17271-201ENSMUST00000165535 355 ntBASIC13.47□□□□□ -0.25
Cd40P27512 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.47□□□□□ -0.25
Cd40P27512 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40P27512 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.47□□□□□ -0.25
Cd40P27512 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cd40P27512 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40P27512 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
Cd40P27512 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.46□□□□□ -0.25
Cd40P27512 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cd40P27512 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cd40P27512 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cd40P27512 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cd40P27512 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cd40P27512 Gm15427-201ENSMUST00000117288 531 ntBASIC13.46□□□□□ -0.25
Cd40P27512 Gm9385-201ENSMUST00000117563 472 ntBASIC13.46□□□□□ -0.25
Cd40P27512 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.46□□□□□ -0.25
Cd40P27512 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cd40P27512 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
Cd40P27512 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40P27512 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms