Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm27703-201ENSMUST00000184836 110 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Mir7023-201ENSMUST00000185093 64 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.3■□□□□ 0.2
Pde6bP23440 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.3■□□□□ 0.2
Pde6bP23440 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.3■□□□□ 0.2
Pde6bP23440 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.3■□□□□ 0.2
Pde6bP23440 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.3■□□□□ 0.2
Pde6bP23440 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pde6bP23440 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.3■□□□□ 0.2
Pde6bP23440 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pde6bP23440 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pde6bP23440 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.29■□□□□ 0.2
Pde6bP23440 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pde6bP23440 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Pde6bP23440 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.29■□□□□ 0.2
Pde6bP23440 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.29■□□□□ 0.2
Pde6bP23440 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pde6bP23440 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Pde6bP23440 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.29■□□□□ 0.2
Pde6bP23440 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pde6bP23440 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.29■□□□□ 0.2
Pde6bP23440 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pde6bP23440 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Pde6bP23440 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pde6bP23440 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Pde6bP23440 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.28■□□□□ 0.2
Pde6bP23440 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pde6bP23440 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pde6bP23440 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.28■□□□□ 0.2
Pde6bP23440 Prob1-201ENSMUST00000097619 3021 ntBASIC16.27■□□□□ 0.2
Pde6bP23440 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pde6bP23440 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Gm25287-201ENSMUST00000103846 110 ntBASIC16.27■□□□□ 0.2
Pde6bP23440 Gm22918-201ENSMUST00000103855 110 ntBASIC16.27■□□□□ 0.2
Pde6bP23440 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.27■□□□□ 0.2
Pde6bP23440 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.27■□□□□ 0.2
Pde6bP23440 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.27■□□□□ 0.2
Pde6bP23440 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pde6bP23440 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.27■□□□□ 0.19
Pde6bP23440 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6bP23440 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pde6bP23440 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms