Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxb9P20615 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hoxb9P20615 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxb9P20615 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxb9P20615 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxb9P20615 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.28□□□□□ -0.12
Hoxb9P20615 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Hoxb9P20615 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hoxb9P20615 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Hoxb9P20615 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hoxb9P20615 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxb9P20615 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.27□□□□□ -0.13
Hoxb9P20615 Gm9727-201ENSMUST00000161387 555 ntBASIC14.27□□□□□ -0.13
Hoxb9P20615 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.27□□□□□ -0.13
Hoxb9P20615 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxb9P20615 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxb9P20615 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.26□□□□□ -0.13
Hoxb9P20615 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.26□□□□□ -0.13
Hoxb9P20615 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Gm8749-201ENSMUST00000117737 331 ntBASIC14.26□□□□□ -0.13
Hoxb9P20615 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.26□□□□□ -0.13
Hoxb9P20615 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb9P20615 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.26□□□□□ -0.13
Hoxb9P20615 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Gm13464-201ENSMUST00000119418 935 ntBASIC14.25□□□□□ -0.13
Hoxb9P20615 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Gm23547-201ENSMUST00000158210 271 ntBASIC14.25□□□□□ -0.13
Hoxb9P20615 Gm16026-204ENSMUST00000162652 683 ntBASIC14.25□□□□□ -0.13
Hoxb9P20615 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb9P20615 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxb9P20615 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms