Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cxcl1P12850 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cxcl1P12850 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl1P12850 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.37□□□□□ -0.43
Cxcl1P12850 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.37□□□□□ -0.43
Cxcl1P12850 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl1P12850 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.36□□□□□ -0.43
Cxcl1P12850 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.36□□□□□ -0.43
Cxcl1P12850 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.36□□□□□ -0.43
Cxcl1P12850 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Cxcl1P12850 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cxcl1P12850 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.36□□□□□ -0.43
Cxcl1P12850 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl1P12850 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.35□□□□□ -0.43
Cxcl1P12850 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cxcl1P12850 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl1P12850 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.34□□□□□ -0.43
Cxcl1P12850 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.34□□□□□ -0.43
Cxcl1P12850 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.34□□□□□ -0.43
Cxcl1P12850 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.34□□□□□ -0.43
Cxcl1P12850 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.34□□□□□ -0.43
Cxcl1P12850 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cxcl1P12850 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl1P12850 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms