Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Gm15653-201ENSMUST00000119247 907 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 Gm13464-201ENSMUST00000119418 935 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 Gm6222-201ENSMUST00000120787 396 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccl3P10855 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccl3P10855 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 Dupd1-202ENSMUST00000224735 548 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Dancr-204ENSMUST00000132389 2347 ntBASIC13.12□□□□□ -0.31
Ccl3P10855 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl3P10855 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccl3P10855 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Gm14928-201ENSMUST00000120198 477 ntBASIC13.11□□□□□ -0.31
Ccl3P10855 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccl3P10855 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Gm43703-201ENSMUST00000200523 763 ntBASIC13.11□□□□□ -0.31
Ccl3P10855 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Gm16476-201ENSMUST00000221544 139 ntBASIC13.11□□□□□ -0.31
Ccl3P10855 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ccl3P10855 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccl3P10855 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccl3P10855 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl3P10855 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccl3P10855 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccl3P10855 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.1□□□□□ -0.31
Ccl3P10855 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccl3P10855 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.1□□□□□ -0.31
Ccl3P10855 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccl3P10855 Gm14127-201ENSMUST00000117906 678 ntBASIC13.1□□□□□ -0.31
Ccl3P10855 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccl3P10855 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccl3P10855 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl3P10855 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Ccl3P10855 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms