Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl1P10146 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl1P10146 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Ccl1P10146 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl1P10146 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Ccl1P10146 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Acot6-202ENSMUST00000222921 3622 ntBASIC11.59□□□□□ -0.55
Ccl1P10146 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.59□□□□□ -0.55
Ccl1P10146 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl1P10146 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl1P10146 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Ccl1P10146 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Ccl1P10146 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccl1P10146 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccl1P10146 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccl1P10146 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ccl1P10146 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Gm14722-201ENSMUST00000118943 689 ntBASIC11.58□□□□□ -0.56
Ccl1P10146 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.58□□□□□ -0.56
Ccl1P10146 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Ccl1P10146 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccl1P10146 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl1P10146 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccl1P10146 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccl1P10146 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccl1P10146 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Ccl1P10146 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ccl1P10146 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Ccl1P10146 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccl1P10146 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccl1P10146 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Ccl1P10146 Mir5122-201ENSMUST00000175004 89 ntBASIC11.57□□□□□ -0.56
Ccl1P10146 Gm37722-201ENSMUST00000193757 208 ntBASIC11.57□□□□□ -0.56
Ccl1P10146 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccl1P10146 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.57□□□□□ -0.56
Ccl1P10146 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl1P10146 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.57□□□□□ -0.56
Ccl1P10146 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms