Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rc3h2P0C090 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Gm9824-201ENSMUST00000178707 561 ntBASIC15.15■□□□□ 0.02
Rc3h2P0C090 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rc3h2P0C090 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.14■□□□□ 0.01
Rc3h2P0C090 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.14■□□□□ 0.01
Rc3h2P0C090 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rc3h2P0C090 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h2P0C090 Gm27622-201ENSMUST00000183779 60 ntBASIC15.13■□□□□ 0.01
Rc3h2P0C090 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms