Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Gm14042-201ENSMUST00000120139 833 ntBASIC19.22■□□□□ 0.67
Hoxc9P09633 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Gm43438-201ENSMUST00000198133 379 ntBASIC19.22■□□□□ 0.67
Hoxc9P09633 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxc9P09633 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxc9P09633 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Hoxc9P09633 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc9P09633 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxc9P09633 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.21■□□□□ 0.67
Hoxc9P09633 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.21■□□□□ 0.67
Hoxc9P09633 Gm42612-201ENSMUST00000197986 623 ntBASIC19.21■□□□□ 0.67
Hoxc9P09633 Gm43170-201ENSMUST00000199827 612 ntBASIC19.21■□□□□ 0.67
Hoxc9P09633 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hoxc9P09633 Gm9182-201ENSMUST00000217829 639 ntBASIC19.21■□□□□ 0.67
Hoxc9P09633 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Hoxc9P09633 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hoxc9P09633 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc9P09633 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Gm9522-201ENSMUST00000182394 926 ntBASIC19.2■□□□□ 0.66
Hoxc9P09633 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hoxc9P09633 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc9P09633 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Hoxc9P09633 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.19■□□□□ 0.66
Hoxc9P09633 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.19■□□□□ 0.66
Hoxc9P09633 Gm9229-201ENSMUST00000222777 126 ntBASIC19.19■□□□□ 0.66
Hoxc9P09633 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.19■□□□□ 0.66
Hoxc9P09633 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hoxc9P09633 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc9P09633 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Gm6912-201ENSMUST00000117218 544 ntBASIC19.18■□□□□ 0.66
Hoxc9P09633 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.18■□□□□ 0.66
Hoxc9P09633 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms