Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col4a2P08122 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Col4a2P08122 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Gm12091-201ENSMUST00000146791 830 ntBASIC13.69□□□□□ -0.22
Col4a2P08122 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.69□□□□□ -0.22
Col4a2P08122 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.69□□□□□ -0.22
Col4a2P08122 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.69□□□□□ -0.22
Col4a2P08122 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a2P08122 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col4a2P08122 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col4a2P08122 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.68□□□□□ -0.22
Col4a2P08122 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col4a2P08122 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col4a2P08122 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.68□□□□□ -0.22
Col4a2P08122 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.68□□□□□ -0.22
Col4a2P08122 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.68□□□□□ -0.22
Col4a2P08122 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col4a2P08122 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col4a2P08122 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col4a2P08122 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.67□□□□□ -0.22
Col4a2P08122 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col4a2P08122 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.67□□□□□ -0.22
Col4a2P08122 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Col4a2P08122 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col4a2P08122 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col4a2P08122 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.67□□□□□ -0.22
Col4a2P08122 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.67□□□□□ -0.22
Col4a2P08122 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.67□□□□□ -0.22
Col4a2P08122 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.67□□□□□ -0.22
Col4a2P08122 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col4a2P08122 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col4a2P08122 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Col4a2P08122 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a2P08122 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a2P08122 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a2P08122 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a2P08122 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a2P08122 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.66□□□□□ -0.22
Col4a2P08122 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col4a2P08122 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms