Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm29667-201ENSMUST00000190817 490 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col3a1P08121 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm46209-201ENSMUST00000217912 553 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col3a1P08121 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Col3a1P08121 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col3a1P08121 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col3a1P08121 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm16215-201ENSMUST00000161990 637 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col3a1P08121 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.63■□□□□ 0.41
Col3a1P08121 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col3a1P08121 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col3a1P08121 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Col3a1P08121 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Col3a1P08121 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col3a1P08121 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 AA619741-201ENSMUST00000195095 646 ntBASIC17.62■□□□□ 0.41
Col3a1P08121 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col3a1P08121 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.62■□□□□ 0.41
Col3a1P08121 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col3a1P08121 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.62■□□□□ 0.41
Col3a1P08121 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.61■□□□□ 0.41
Col3a1P08121 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col3a1P08121 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col3a1P08121 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.61■□□□□ 0.41
Col3a1P08121 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col3a1P08121 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.61■□□□□ 0.41
Col3a1P08121 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.61■□□□□ 0.41
Col3a1P08121 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col3a1P08121 Mir125a-201ENSMUST00000083545 68 ntBASIC17.61■□□□□ 0.41
Col3a1P08121 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col3a1P08121 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col3a1P08121 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.61■□□□□ 0.41
Col3a1P08121 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col3a1P08121 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Col3a1P08121 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.6■□□□□ 0.41
Col3a1P08121 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.6■□□□□ 0.41
Col3a1P08121 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.6■□□□□ 0.41
Col3a1P08121 Gm44855-201ENSMUST00000205725 362 ntBASIC17.6■□□□□ 0.41
Col3a1P08121 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.6■□□□□ 0.41
Col3a1P08121 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col3a1P08121 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.6■□□□□ 0.41
Col3a1P08121 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms