Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Gm11025-201ENSMUST00000140773 466 ntBASIC13.29□□□□□ -0.28
P06344 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.29□□□□□ -0.28
P06344 Gm27494-201ENSMUST00000184735 189 ntBASIC13.29□□□□□ -0.28
P06344 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.29□□□□□ -0.28
P06344 Chchd1-203ENSMUST00000224633 557 ntBASIC13.29□□□□□ -0.28
P06344 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06344 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.29□□□□□ -0.28
P06344 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06344 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06344 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P06344 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.29□□□□□ -0.28
P06344 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P06344 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06344 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06344 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.28□□□□□ -0.28
P06344 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
P06344 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
P06344 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.28□□□□□ -0.28
P06344 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.28□□□□□ -0.28
P06344 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
P06344 Mir1895-201ENSMUST00000122615 79 ntBASIC13.28□□□□□ -0.28
P06344 Rpph1-201ENSMUST00000175096 319 ntBASIC13.28□□□□□ -0.28
P06344 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.28□□□□□ -0.28
P06344 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P06344 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.28□□□□□ -0.28
P06344 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.28□□□□□ -0.28
P06344 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
P06344 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P06344 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
P06344 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.28□□□□□ -0.28
P06344 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P06344 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
P06344 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.28□□□□□ -0.28
P06344 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06344 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
P06344 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P06344 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.27□□□□□ -0.28
P06344 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.27□□□□□ -0.28
P06344 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
P06344 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.27□□□□□ -0.28
P06344 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P06344 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
P06344 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
P06344 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.27□□□□□ -0.29
P06344 Gm12134-201ENSMUST00000122109 520 ntBASIC13.27□□□□□ -0.29
P06344 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.27□□□□□ -0.29
P06344 Gm26308-201ENSMUST00000157768 69 ntBASIC13.27□□□□□ -0.29
P06344 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.27□□□□□ -0.29
P06344 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P06344 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.27□□□□□ -0.29
P06344 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
P06344 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
P06344 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms