Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PrnpP04925 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PrnpP04925 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PrnpP04925 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PrnpP04925 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PrnpP04925 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.39■□□□□ 0.05
PrnpP04925 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.39■□□□□ 0.05
PrnpP04925 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.39■□□□□ 0.05
PrnpP04925 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.39■□□□□ 0.05
PrnpP04925 Gm46209-201ENSMUST00000217912 553 ntBASIC15.39■□□□□ 0.05
PrnpP04925 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PrnpP04925 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PrnpP04925 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PrnpP04925 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Gm16476-201ENSMUST00000221544 139 ntBASIC15.38■□□□□ 0.05
PrnpP04925 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PrnpP04925 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.38■□□□□ 0.05
PrnpP04925 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PrnpP04925 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PrnpP04925 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PrnpP04925 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.37■□□□□ 0.05
PrnpP04925 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.37■□□□□ 0.05
PrnpP04925 Gm2451-201ENSMUST00000199447 999 ntBASIC15.37■□□□□ 0.05
PrnpP04925 Gm10290-201ENSMUST00000200451 999 ntBASIC15.37■□□□□ 0.05
PrnpP04925 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.37■□□□□ 0.05
PrnpP04925 Dupd1-202ENSMUST00000224735 548 ntBASIC15.37■□□□□ 0.05
PrnpP04925 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.37■□□□□ 0.05
PrnpP04925 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PrnpP04925 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PrnpP04925 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.36■□□□□ 0.05
PrnpP04925 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PrnpP04925 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PrnpP04925 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PrnpP04925 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PrnpP04925 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.36■□□□□ 0.05
PrnpP04925 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
PrnpP04925 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PrnpP04925 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.36■□□□□ 0.05
PrnpP04925 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.36■□□□□ 0.05
PrnpP04925 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms