Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col4a1P02463 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.11■□□□□ 0.49
Col4a1P02463 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col4a1P02463 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col4a1P02463 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Col4a1P02463 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a1P02463 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Gm14127-201ENSMUST00000117906 678 ntBASIC18.1■□□□□ 0.49
Col4a1P02463 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Col4a1P02463 Gm10275-202ENSMUST00000168697 495 ntBASIC18.1■□□□□ 0.49
Col4a1P02463 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 Gm10275-201ENSMUST00000092620 635 ntBASIC18.1■□□□□ 0.49
Col4a1P02463 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a1P02463 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a1P02463 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Gm12091-201ENSMUST00000146791 830 ntBASIC18.09■□□□□ 0.49
Col4a1P02463 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.09■□□□□ 0.49
Col4a1P02463 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col4a1P02463 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.09■□□□□ 0.49
Col4a1P02463 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.09■□□□□ 0.49
Col4a1P02463 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col4a1P02463 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Col4a1P02463 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a1P02463 Gm28760-201ENSMUST00000185995 736 ntBASIC18.09■□□□□ 0.49
Col4a1P02463 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.09■□□□□ 0.49
Col4a1P02463 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a1P02463 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a1P02463 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a1P02463 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a1P02463 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a1P02463 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.08■□□□□ 0.49
Col4a1P02463 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a1P02463 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a1P02463 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a1P02463 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a1P02463 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Col4a1P02463 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.08■□□□□ 0.48
Col4a1P02463 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.08■□□□□ 0.48
Col4a1P02463 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.08■□□□□ 0.48
Col4a1P02463 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Col4a1P02463 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.08■□□□□ 0.48
Col4a1P02463 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a1P02463 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a1P02463 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col4a1P02463 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Col4a1P02463 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.07■□□□□ 0.48
Col4a1P02463 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col4a1P02463 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a1P02463 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.07■□□□□ 0.48
Col4a1P02463 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col4a1P02463 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Gm18018-201ENSMUST00000198273 408 ntBASIC18.06■□□□□ 0.48
Col4a1P02463 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a1P02463 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms