Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01788 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
P01788 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01788 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01788 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01788 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.81□□□□□ -0.52
P01788 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
P01788 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
P01788 Gm15358-201ENSMUST00000119249 520 ntBASIC11.81□□□□□ -0.52
P01788 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
P01788 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.81□□□□□ -0.52
P01788 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.81□□□□□ -0.52
P01788 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.81□□□□□ -0.52
P01788 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
P01788 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.81□□□□□ -0.52
P01788 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01788 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.81□□□□□ -0.52
P01788 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P01788 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.81□□□□□ -0.52
P01788 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.81□□□□□ -0.52
P01788 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.81□□□□□ -0.52
P01788 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P01788 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01788 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01788 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P01788 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.8□□□□□ -0.52
P01788 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01788 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
P01788 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.8□□□□□ -0.52
P01788 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P01788 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.8□□□□□ -0.52
P01788 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P01788 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
P01788 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P01788 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01788 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.79□□□□□ -0.52
P01788 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
P01788 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
P01788 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P01788 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.79□□□□□ -0.52
P01788 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.79□□□□□ -0.52
P01788 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P01788 Gm8097-201ENSMUST00000117903 829 ntBASIC11.79□□□□□ -0.52
P01788 Gm23547-201ENSMUST00000158210 271 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms