Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Yme1l1O88967 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Yme1l1O88967 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Yme1l1O88967 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Yme1l1O88967 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.55■□□□□ 0.08
Yme1l1O88967 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.55■□□□□ 0.08
Yme1l1O88967 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Gm23984-201ENSMUST00000157139 203 ntBASIC15.55■□□□□ 0.08
Yme1l1O88967 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Gm8515-201ENSMUST00000194852 576 ntBASIC15.55■□□□□ 0.08
Yme1l1O88967 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Gm20445-201ENSMUST00000061905 565 ntBASIC15.55■□□□□ 0.08
Yme1l1O88967 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Yme1l1O88967 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.55■□□□□ 0.08
Yme1l1O88967 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.54■□□□□ 0.08
Yme1l1O88967 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.54■□□□□ 0.08
Yme1l1O88967 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.54■□□□□ 0.08
Yme1l1O88967 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Yme1l1O88967 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.53■□□□□ 0.08
Yme1l1O88967 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Gm11478-201ENSMUST00000117851 599 ntBASIC15.53■□□□□ 0.08
Yme1l1O88967 Gm4875-201ENSMUST00000118257 786 ntBASIC15.53■□□□□ 0.08
Yme1l1O88967 Gm15653-201ENSMUST00000119247 907 ntBASIC15.53■□□□□ 0.08
Yme1l1O88967 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.53■□□□□ 0.08
Yme1l1O88967 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Yme1l1O88967 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Yme1l1O88967 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.52■□□□□ 0.08
Yme1l1O88967 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Yme1l1O88967 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.52■□□□□ 0.08
Yme1l1O88967 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.52■□□□□ 0.08
Yme1l1O88967 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.52■□□□□ 0.08
Yme1l1O88967 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.52■□□□□ 0.08
Yme1l1O88967 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.52■□□□□ 0.08
Yme1l1O88967 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms