Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hdac3O88895 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdac3O88895 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Hdac3O88895 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hdac3O88895 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.37□□□□□ -0.27
Hdac3O88895 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.37□□□□□ -0.27
Hdac3O88895 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.37□□□□□ -0.27
Hdac3O88895 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.37□□□□□ -0.27
Hdac3O88895 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.37□□□□□ -0.27
Hdac3O88895 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Hdac3O88895 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hdac3O88895 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Hdac3O88895 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.37□□□□□ -0.27
Hdac3O88895 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.37□□□□□ -0.27
Hdac3O88895 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdac3O88895 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Hdac3O88895 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.36□□□□□ -0.27
Hdac3O88895 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.36□□□□□ -0.27
Hdac3O88895 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hdac3O88895 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.36□□□□□ -0.27
Hdac3O88895 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdac3O88895 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hdac3O88895 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hdac3O88895 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hdac3O88895 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Hdac3O88895 Gm25990-201ENSMUST00000102440 86 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.35□□□□□ -0.27
Hdac3O88895 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.35□□□□□ -0.27
Hdac3O88895 Gm13418-201ENSMUST00000119097 944 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm7862-201ENSMUST00000121461 292 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms