Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apaf1O88879 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apaf1O88879 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apaf1O88879 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apaf1O88879 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Apaf1O88879 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.37■□□□□ 0.69
Apaf1O88879 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Apaf1O88879 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Apaf1O88879 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Apaf1O88879 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.36■□□□□ 0.69
Apaf1O88879 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.36■□□□□ 0.69
Apaf1O88879 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Apaf1O88879 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Apaf1O88879 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Apaf1O88879 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Apaf1O88879 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Apaf1O88879 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.36■□□□□ 0.69
Apaf1O88879 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.36■□□□□ 0.69
Apaf1O88879 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.36■□□□□ 0.69
Apaf1O88879 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.36■□□□□ 0.69
Apaf1O88879 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Apaf1O88879 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
Apaf1O88879 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.35■□□□□ 0.69
Apaf1O88879 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Apaf1O88879 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 Gm27920-201ENSMUST00000183953 96 ntBASIC19.35■□□□□ 0.69
Apaf1O88879 Gm43125-201ENSMUST00000201724 730 ntBASIC19.35■□□□□ 0.69
Apaf1O88879 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.35■□□□□ 0.69
Apaf1O88879 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.35■□□□□ 0.69
Apaf1O88879 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Apaf1O88879 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Apaf1O88879 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.34■□□□□ 0.69
Apaf1O88879 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Apaf1O88879 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
Apaf1O88879 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Apaf1O88879 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.34■□□□□ 0.69
Apaf1O88879 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Apaf1O88879 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.34■□□□□ 0.69
Apaf1O88879 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Apaf1O88879 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Apaf1O88879 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Apaf1O88879 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.33■□□□□ 0.68
Apaf1O88879 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.33■□□□□ 0.68
Apaf1O88879 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Apaf1O88879 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.33■□□□□ 0.68
Apaf1O88879 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Apaf1O88879 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Apaf1O88879 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Apaf1O88879 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Apaf1O88879 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.33■□□□□ 0.68
Apaf1O88879 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Apaf1O88879 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms