Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.14■□□□□ 0.49
Cops6O88545 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.14■□□□□ 0.49
Cops6O88545 Shd-206ENSMUST00000225145 998 ntBASIC18.14■□□□□ 0.49
Cops6O88545 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.14■□□□□ 0.49
Cops6O88545 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cops6O88545 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Gm2423-201ENSMUST00000074863 733 ntBASIC18.14■□□□□ 0.49
Cops6O88545 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cops6O88545 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops6O88545 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cops6O88545 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.13■□□□□ 0.49
Cops6O88545 Gm15487-201ENSMUST00000122373 465 ntBASIC18.13■□□□□ 0.49
Cops6O88545 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.13■□□□□ 0.49
Cops6O88545 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.13■□□□□ 0.49
Cops6O88545 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.13■□□□□ 0.49
Cops6O88545 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cops6O88545 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cops6O88545 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.12■□□□□ 0.49
Cops6O88545 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cops6O88545 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cops6O88545 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.12■□□□□ 0.49
Cops6O88545 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.12■□□□□ 0.49
Cops6O88545 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.12■□□□□ 0.49
Cops6O88545 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cops6O88545 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.12■□□□□ 0.49
Cops6O88545 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cops6O88545 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Cops6O88545 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops6O88545 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.12■□□□□ 0.49
Cops6O88545 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cops6O88545 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.11■□□□□ 0.49
Cops6O88545 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.11■□□□□ 0.49
Cops6O88545 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.11■□□□□ 0.49
Cops6O88545 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cops6O88545 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.11■□□□□ 0.49
Cops6O88545 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops6O88545 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops6O88545 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms