Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nid2O88322 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nid2O88322 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Nid2O88322 Gm15393-201ENSMUST00000120499 219 ntBASIC19.18■□□□□ 0.66
Nid2O88322 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC19.18■□□□□ 0.66
Nid2O88322 Gm28911-201ENSMUST00000188837 117 ntBASIC19.18■□□□□ 0.66
Nid2O88322 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.18■□□□□ 0.66
Nid2O88322 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.18■□□□□ 0.66
Nid2O88322 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.18■□□□□ 0.66
Nid2O88322 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 AC166349.1-201ENSMUST00000220866 695 ntBASIC19.18■□□□□ 0.66
Nid2O88322 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nid2O88322 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Nid2O88322 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Nid2O88322 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Nid2O88322 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nid2O88322 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nid2O88322 Gm15460-201ENSMUST00000118147 391 ntBASIC19.17■□□□□ 0.66
Nid2O88322 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.17■□□□□ 0.66
Nid2O88322 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Gm9726-201ENSMUST00000180321 678 ntBASIC19.17■□□□□ 0.66
Nid2O88322 Gm38319-201ENSMUST00000194537 1266 ntBASIC19.17■□□□□ 0.66
Nid2O88322 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nid2O88322 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nid2O88322 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Nid2O88322 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC19.17■□□□□ 0.66
Nid2O88322 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.17■□□□□ 0.66
Nid2O88322 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.17■□□□□ 0.66
Nid2O88322 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nid2O88322 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nid2O88322 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nid2O88322 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC19.17■□□□□ 0.66
Nid2O88322 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC19.17■□□□□ 0.66
Nid2O88322 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.17■□□□□ 0.66
Nid2O88322 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nid2O88322 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.16■□□□□ 0.66
Nid2O88322 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.16■□□□□ 0.66
Nid2O88322 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.16■□□□□ 0.66
Nid2O88322 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nid2O88322 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.16■□□□□ 0.66
Nid2O88322 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Nid2O88322 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nid2O88322 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nid2O88322 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nid2O88322 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nid2O88322 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid2O88322 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid2O88322 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nid2O88322 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms