Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ubr1O70481 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ubr1O70481 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.09■□□□□ 0.65
Ubr1O70481 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC19.09■□□□□ 0.65
Ubr1O70481 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ubr1O70481 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.08■□□□□ 0.65
Ubr1O70481 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubr1O70481 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ubr1O70481 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ubr1O70481 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubr1O70481 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ubr1O70481 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Gm12585-201ENSMUST00000117307 290 ntBASIC19.08■□□□□ 0.64
Ubr1O70481 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.08■□□□□ 0.64
Ubr1O70481 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.08■□□□□ 0.64
Ubr1O70481 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC19.08■□□□□ 0.64
Ubr1O70481 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ubr1O70481 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC19.08■□□□□ 0.64
Ubr1O70481 Gm37917-201ENSMUST00000194711 392 ntBASIC19.08■□□□□ 0.64
Ubr1O70481 Gm9908-201ENSMUST00000211534 448 ntBASIC19.08■□□□□ 0.64
Ubr1O70481 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
Ubr1O70481 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubr1O70481 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.07■□□□□ 0.64
Ubr1O70481 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ubr1O70481 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Gm15460-201ENSMUST00000118147 391 ntBASIC19.07■□□□□ 0.64
Ubr1O70481 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.07■□□□□ 0.64
Ubr1O70481 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.07■□□□□ 0.64
Ubr1O70481 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ubr1O70481 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubr1O70481 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Ubr1O70481 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ubr1O70481 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ubr1O70481 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubr1O70481 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ubr1O70481 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ubr1O70481 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.05■□□□□ 0.64
Ubr1O70481 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ubr1O70481 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.05■□□□□ 0.64
Ubr1O70481 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.05■□□□□ 0.64
Ubr1O70481 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Ubr1O70481 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubr1O70481 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubr1O70481 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms