Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp8O70138 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.16■□□□□ 0.5
Mmp8O70138 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Mmp8O70138 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mmp8O70138 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.16■□□□□ 0.5
Mmp8O70138 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.16■□□□□ 0.5
Mmp8O70138 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Mmp8O70138 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Mmp8O70138 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Mmp8O70138 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Mmp8O70138 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Mmp8O70138 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp8O70138 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Mmp8O70138 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.15■□□□□ 0.5
Mmp8O70138 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Mmp8O70138 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.15■□□□□ 0.5
Mmp8O70138 Gm6973-201ENSMUST00000117080 721 ntBASIC18.15■□□□□ 0.5
Mmp8O70138 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.15■□□□□ 0.5
Mmp8O70138 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Mmp8O70138 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Mmp8O70138 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp8O70138 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Mmp8O70138 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp8O70138 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp8O70138 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp8O70138 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp8O70138 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp8O70138 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp8O70138 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Gm11745-201ENSMUST00000121669 448 ntBASIC18.14■□□□□ 0.49
Mmp8O70138 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Mmp8O70138 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.14■□□□□ 0.49
Mmp8O70138 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Mmp8O70138 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Mmp8O70138 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Mmp8O70138 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp8O70138 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Mmp8O70138 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.13■□□□□ 0.49
Mmp8O70138 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.13■□□□□ 0.49
Mmp8O70138 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.13■□□□□ 0.49
Mmp8O70138 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp8O70138 Gm9726-201ENSMUST00000180321 678 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms