Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Rdh5O55240 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rdh5O55240 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.14□□□□□ -0.15
Rdh5O55240 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Gm5264-201ENSMUST00000190584 848 ntBASIC14.14□□□□□ -0.15
Rdh5O55240 Gm2213-201ENSMUST00000197485 688 ntBASIC14.14□□□□□ -0.15
Rdh5O55240 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.14□□□□□ -0.15
Rdh5O55240 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Rdh5O55240 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.14□□□□□ -0.15
Rdh5O55240 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rdh5O55240 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rdh5O55240 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rdh5O55240 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Rdh5O55240 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rdh5O55240 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rdh5O55240 Gm15467-201ENSMUST00000120582 445 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Gm27300-201ENSMUST00000184085 97 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Gm27335-201ENSMUST00000184758 97 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.13□□□□□ -0.15
Rdh5O55240 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.13□□□□□ -0.15
Rdh5O55240 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.13□□□□□ -0.15
Rdh5O55240 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rdh5O55240 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.13□□□□□ -0.15
Rdh5O55240 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rdh5O55240 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rdh5O55240 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rdh5O55240 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.12□□□□□ -0.15
Rdh5O55240 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rdh5O55240 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Gm11779-201ENSMUST00000118541 368 ntBASIC14.12□□□□□ -0.15
Rdh5O55240 Gm14140-201ENSMUST00000119999 995 ntBASIC14.12□□□□□ -0.15
Rdh5O55240 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.12□□□□□ -0.15
Rdh5O55240 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.12□□□□□ -0.15
Rdh5O55240 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.12□□□□□ -0.15
Rdh5O55240 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.12□□□□□ -0.15
Rdh5O55240 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rdh5O55240 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms