Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Prob1-201ENSMUST00000097619 3021 ntBASIC16.36■□□□□ 0.21
Trdmt1O55055 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdmt1O55055 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trdmt1O55055 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Trdmt1O55055 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Gm8749-201ENSMUST00000117737 331 ntBASIC16.35■□□□□ 0.21
Trdmt1O55055 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.35■□□□□ 0.21
Trdmt1O55055 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Gm9794-201ENSMUST00000202370 423 ntBASIC16.35■□□□□ 0.21
Trdmt1O55055 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.35■□□□□ 0.21
Trdmt1O55055 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.35■□□□□ 0.21
Trdmt1O55055 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.35■□□□□ 0.21
Trdmt1O55055 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.35■□□□□ 0.21
Trdmt1O55055 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdmt1O55055 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.34■□□□□ 0.21
Trdmt1O55055 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.34■□□□□ 0.21
Trdmt1O55055 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trdmt1O55055 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trdmt1O55055 Gm12859-201ENSMUST00000117834 427 ntBASIC16.34■□□□□ 0.21
Trdmt1O55055 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trdmt1O55055 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.34■□□□□ 0.21
Trdmt1O55055 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trdmt1O55055 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdmt1O55055 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.34■□□□□ 0.21
Trdmt1O55055 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trdmt1O55055 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trdmt1O55055 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trdmt1O55055 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.33■□□□□ 0.21
Trdmt1O55055 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.33■□□□□ 0.2
Trdmt1O55055 Gm43438-201ENSMUST00000198133 379 ntBASIC16.33■□□□□ 0.2
Trdmt1O55055 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trdmt1O55055 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.33■□□□□ 0.2
Trdmt1O55055 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trdmt1O55055 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdmt1O55055 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.33■□□□□ 0.2
Trdmt1O55055 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Gm12490-201ENSMUST00000120255 560 ntBASIC16.32■□□□□ 0.2
Trdmt1O55055 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.32■□□□□ 0.2
Trdmt1O55055 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trdmt1O55055 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.32■□□□□ 0.2
Trdmt1O55055 Gm3436-201ENSMUST00000179930 840 ntBASIC16.32■□□□□ 0.2
Trdmt1O55055 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.32■□□□□ 0.2
Trdmt1O55055 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.32■□□□□ 0.2
Trdmt1O55055 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Trdmt1O55055 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdmt1O55055 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.32■□□□□ 0.2
Trdmt1O55055 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trdmt1O55055 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms