Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cacna1bO55017 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1bO55017 App-207ENSMUST00000227737 2827 ntBASIC14.37□□□□□ -0.11
Cacna1bO55017 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.37□□□□□ -0.11
Cacna1bO55017 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cacna1bO55017 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.37□□□□□ -0.11
Cacna1bO55017 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cacna1bO55017 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.37□□□□□ -0.11
Cacna1bO55017 Gm11918-201ENSMUST00000121660 179 ntBASIC14.37□□□□□ -0.11
Cacna1bO55017 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Gm8515-201ENSMUST00000194852 576 ntBASIC14.37□□□□□ -0.11
Cacna1bO55017 Gm20445-201ENSMUST00000061905 565 ntBASIC14.37□□□□□ -0.11
Cacna1bO55017 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.37□□□□□ -0.11
Cacna1bO55017 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1bO55017 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.36□□□□□ -0.11
Cacna1bO55017 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Gm14042-201ENSMUST00000120139 833 ntBASIC14.36□□□□□ -0.11
Cacna1bO55017 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.36□□□□□ -0.11
Cacna1bO55017 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cacna1bO55017 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cacna1bO55017 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.36□□□□□ -0.11
Cacna1bO55017 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.36□□□□□ -0.11
Cacna1bO55017 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1bO55017 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Gm24543-201ENSMUST00000103867 82 ntBASIC14.35□□□□□ -0.11
Cacna1bO55017 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.35□□□□□ -0.11
Cacna1bO55017 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Cacna1bO55017 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Mir1938-201ENSMUST00000158746 100 ntBASIC14.35□□□□□ -0.11
Cacna1bO55017 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.35□□□□□ -0.11
Cacna1bO55017 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cacna1bO55017 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1bO55017 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1bO55017 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1bO55017 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cacna1bO55017 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Gm5479-201ENSMUST00000160578 435 ntBASIC14.34□□□□□ -0.11
Cacna1bO55017 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1bO55017 Prob1-201ENSMUST00000097619 3021 ntBASIC14.34□□□□□ -0.11
Cacna1bO55017 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.34□□□□□ -0.11
Cacna1bO55017 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms