Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Per2O54943 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Per2O54943 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Per2O54943 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Per2O54943 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Per2O54943 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.56■□□□□ 0.08
Per2O54943 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Per2O54943 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.55■□□□□ 0.08
Per2O54943 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Per2O54943 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.55■□□□□ 0.08
Per2O54943 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.55■□□□□ 0.08
Per2O54943 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.55■□□□□ 0.08
Per2O54943 Mir5131-201ENSMUST00000175426 93 ntBASIC15.55■□□□□ 0.08
Per2O54943 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.55■□□□□ 0.08
Per2O54943 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.55■□□□□ 0.08
Per2O54943 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.55■□□□□ 0.08
Per2O54943 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Per2O54943 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Per2O54943 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Per2O54943 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.54■□□□□ 0.08
Per2O54943 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.54■□□□□ 0.08
Per2O54943 Mir5126-201ENSMUST00000175513 77 ntBASIC15.54■□□□□ 0.08
Per2O54943 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.54■□□□□ 0.08
Per2O54943 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Gm15590-201ENSMUST00000078419 552 ntBASIC15.54■□□□□ 0.08
Per2O54943 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Per2O54943 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Per2O54943 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Per2O54943 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.53■□□□□ 0.08
Per2O54943 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.53■□□□□ 0.08
Per2O54943 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.53■□□□□ 0.08
Per2O54943 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Per2O54943 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.53■□□□□ 0.08
Per2O54943 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Per2O54943 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Per2O54943 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Per2O54943 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Per2O54943 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms