Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Matn3O35701 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Matn3O35701 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Matn3O35701 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.59□□□□□ -0.23
Matn3O35701 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Matn3O35701 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Matn3O35701 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.58□□□□□ -0.23
Matn3O35701 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Matn3O35701 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.58□□□□□ -0.23
Matn3O35701 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Matn3O35701 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Matn3O35701 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Matn3O35701 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Matn3O35701 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Matn3O35701 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.58□□□□□ -0.24
Matn3O35701 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Matn3O35701 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.58□□□□□ -0.24
Matn3O35701 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Matn3O35701 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Matn3O35701 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Matn3O35701 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.57□□□□□ -0.24
Matn3O35701 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Matn3O35701 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.57□□□□□ -0.24
Matn3O35701 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.57□□□□□ -0.24
Matn3O35701 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Matn3O35701 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.57□□□□□ -0.24
Matn3O35701 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.57□□□□□ -0.24
Matn3O35701 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Matn3O35701 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Matn3O35701 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Matn3O35701 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Matn3O35701 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.56□□□□□ -0.24
Matn3O35701 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Matn3O35701 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Matn3O35701 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.56□□□□□ -0.24
Matn3O35701 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.56□□□□□ -0.24
Matn3O35701 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.56□□□□□ -0.24
Matn3O35701 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Matn3O35701 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms