Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clk4O35493 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clk4O35493 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clk4O35493 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.37□□□□□ -0.11
Clk4O35493 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clk4O35493 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clk4O35493 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clk4O35493 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.36□□□□□ -0.11
Clk4O35493 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clk4O35493 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Clk4O35493 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.36□□□□□ -0.11
Clk4O35493 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Clk4O35493 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clk4O35493 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.36□□□□□ -0.11
Clk4O35493 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clk4O35493 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clk4O35493 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.35□□□□□ -0.11
Clk4O35493 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clk4O35493 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.35□□□□□ -0.11
Clk4O35493 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.35□□□□□ -0.11
Clk4O35493 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.35□□□□□ -0.11
Clk4O35493 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk4O35493 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Clk4O35493 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.34□□□□□ -0.11
Clk4O35493 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.34□□□□□ -0.11
Clk4O35493 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Clk4O35493 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.34□□□□□ -0.11
Clk4O35493 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.34□□□□□ -0.11
Clk4O35493 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.34□□□□□ -0.11
Clk4O35493 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.34□□□□□ -0.11
Clk4O35493 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.34□□□□□ -0.11
Clk4O35493 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clk4O35493 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk4O35493 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms