Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm6312-201ENSMUST00000204060 1194 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 AC069561.2-201ENSMUST00000217596 420 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn6O35454 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clcn6O35454 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clcn6O35454 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn6O35454 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.28■□□□□ 0.2
Clcn6O35454 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn6O35454 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clcn6O35454 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcn6O35454 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn6O35454 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn6O35454 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Clcn6O35454 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Gm9013-201ENSMUST00000132939 882 ntBASIC16.27■□□□□ 0.2
Clcn6O35454 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC16.27■□□□□ 0.2
Clcn6O35454 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn6O35454 Gm38201-201ENSMUST00000192143 387 ntBASIC16.27■□□□□ 0.2
Clcn6O35454 Gm5587-201ENSMUST00000206270 674 ntBASIC16.27■□□□□ 0.2
Clcn6O35454 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clcn6O35454 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clcn6O35454 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn6O35454 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.27■□□□□ 0.2
Clcn6O35454 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Clcn6O35454 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn6O35454 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn6O35454 AC122539.3-201ENSMUST00000218355 1431 ntBASIC16.27■□□□□ 0.19
Clcn6O35454 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn6O35454 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.27■□□□□ 0.19
Clcn6O35454 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clcn6O35454 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Clcn6O35454 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Gm14859-201ENSMUST00000117752 357 ntBASIC16.26■□□□□ 0.19
Clcn6O35454 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Gm4540-201ENSMUST00000170669 429 ntBASIC16.26■□□□□ 0.19
Clcn6O35454 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clcn6O35454 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.26■□□□□ 0.19
Clcn6O35454 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.26■□□□□ 0.19
Clcn6O35454 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn6O35454 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcn6O35454 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Gm44509-201ENSMUST00000205400 1324 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Clcn6O35454 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.25■□□□□ 0.19
Clcn6O35454 Gm17075-201ENSMUST00000171924 670 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 Gm43667-201ENSMUST00000198616 1095 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.25■□□□□ 0.19
Clcn6O35454 Gm44809-201ENSMUST00000208305 993 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 AL929417.1-201ENSMUST00000214901 124 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 AC122305.2-201ENSMUST00000215148 834 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 AC133517.2-201ENSMUST00000226820 690 ntBASIC16.25■□□□□ 0.19
Clcn6O35454 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clcn6O35454 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clcn6O35454 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clcn6O35454 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Clcn6O35454 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Clcn6O35454 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn6O35454 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms