Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.98□□□□□ -0.33
Atf6bO35451 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.98□□□□□ -0.33
Atf6bO35451 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.98□□□□□ -0.33
Atf6bO35451 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.98□□□□□ -0.33
Atf6bO35451 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Atf6bO35451 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Atf6bO35451 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6bO35451 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Atf6bO35451 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.97□□□□□ -0.33
Atf6bO35451 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.97□□□□□ -0.33
Atf6bO35451 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.97□□□□□ -0.33
Atf6bO35451 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.97□□□□□ -0.33
Atf6bO35451 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.97□□□□□ -0.33
Atf6bO35451 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Atf6bO35451 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.97□□□□□ -0.33
Atf6bO35451 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.97□□□□□ -0.33
Atf6bO35451 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.97□□□□□ -0.33
Atf6bO35451 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Atf6bO35451 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6bO35451 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Atf6bO35451 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.96□□□□□ -0.33
Atf6bO35451 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.96□□□□□ -0.33
Atf6bO35451 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Atf6bO35451 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.96□□□□□ -0.33
Atf6bO35451 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Atf6bO35451 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6bO35451 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6bO35451 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6bO35451 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6bO35451 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6bO35451 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Atf6bO35451 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Atf6bO35451 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6bO35451 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms