Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col15a1O35206 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col15a1O35206 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col15a1O35206 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col15a1O35206 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col15a1O35206 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.95■□□□□ 0.62
Col15a1O35206 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.95■□□□□ 0.62
Col15a1O35206 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.95■□□□□ 0.62
Col15a1O35206 Gm9182-201ENSMUST00000217829 639 ntBASIC18.95■□□□□ 0.62
Col15a1O35206 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col15a1O35206 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.95■□□□□ 0.62
Col15a1O35206 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.95■□□□□ 0.62
Col15a1O35206 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col15a1O35206 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Col15a1O35206 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Col15a1O35206 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.94■□□□□ 0.62
Col15a1O35206 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.94■□□□□ 0.62
Col15a1O35206 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.94■□□□□ 0.62
Col15a1O35206 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col15a1O35206 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.94■□□□□ 0.62
Col15a1O35206 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col15a1O35206 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.94■□□□□ 0.62
Col15a1O35206 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col15a1O35206 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col15a1O35206 Mir7085-201ENSMUST00000184353 66 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.93■□□□□ 0.62
Col15a1O35206 Gm6916-202ENSMUST00000205523 195 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.93■□□□□ 0.62
Col15a1O35206 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Col15a1O35206 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col15a1O35206 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col15a1O35206 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Gm11478-201ENSMUST00000117851 599 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.93■□□□□ 0.62
Col15a1O35206 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.93■□□□□ 0.62
Col15a1O35206 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 AA619741-201ENSMUST00000195095 646 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.93■□□□□ 0.62
Col15a1O35206 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col15a1O35206 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col15a1O35206 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col15a1O35206 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col15a1O35206 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.92■□□□□ 0.62
Col15a1O35206 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col15a1O35206 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col15a1O35206 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.92■□□□□ 0.62
Col15a1O35206 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms