Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cl1O35188 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.03□□□□□ -0.16
Cx3cl1O35188 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.03□□□□□ -0.16
Cx3cl1O35188 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cl1O35188 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.02□□□□□ -0.16
Cx3cl1O35188 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cl1O35188 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.02□□□□□ -0.16
Cx3cl1O35188 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.02□□□□□ -0.17
Cx3cl1O35188 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.02□□□□□ -0.17
Cx3cl1O35188 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cl1O35188 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Celf4-206ENSMUST00000224553 1729 ntBASIC14.01□□□□□ -0.17
Cx3cl1O35188 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Gm5177-201ENSMUST00000183092 997 ntBASIC14.01□□□□□ -0.17
Cx3cl1O35188 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cl1O35188 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms