Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.32□□□□□ -0.28
Alx4O35137 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.32□□□□□ -0.28
Alx4O35137 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Alx4O35137 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Alx4O35137 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Alx4O35137 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx4O35137 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Alx4O35137 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Alx4O35137 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Alx4O35137 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Alx4O35137 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.31□□□□□ -0.28
Alx4O35137 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Alx4O35137 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx4O35137 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.3□□□□□ -0.28
Alx4O35137 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Alx4O35137 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Alx4O35137 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Alx4O35137 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx4O35137 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Alx4O35137 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Alx4O35137 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx4O35137 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Gm27646-201ENSMUST00000183989 110 ntBASIC13.29□□□□□ -0.28
Alx4O35137 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.29□□□□□ -0.28
Alx4O35137 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.29□□□□□ -0.28
Alx4O35137 Gm6296-201ENSMUST00000222599 943 ntBASIC13.29□□□□□ -0.28
Alx4O35137 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.29□□□□□ -0.28
Alx4O35137 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Alx4O35137 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx4O35137 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx4O35137 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx4O35137 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Alx4O35137 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx4O35137 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Alx4O35137 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms