Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.9□□□□□ -0.34
Gfra3O35118 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Gfra3O35118 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.9□□□□□ -0.34
Gfra3O35118 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.9□□□□□ -0.34
Gfra3O35118 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.9□□□□□ -0.34
Gfra3O35118 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.9□□□□□ -0.34
Gfra3O35118 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gfra3O35118 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gfra3O35118 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gfra3O35118 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gfra3O35118 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gfra3O35118 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gfra3O35118 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gfra3O35118 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gfra3O35118 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.9□□□□□ -0.35
Gfra3O35118 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.89□□□□□ -0.35
Gfra3O35118 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gfra3O35118 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Gfra3O35118 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gfra3O35118 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.89□□□□□ -0.35
Gfra3O35118 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gfra3O35118 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gfra3O35118 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gfra3O35118 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 Gm13365-201ENSMUST00000121188 973 ntBASIC12.88□□□□□ -0.35
Gfra3O35118 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
Gfra3O35118 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.88□□□□□ -0.35
Gfra3O35118 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.88□□□□□ -0.35
Gfra3O35118 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Gfra3O35118 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.88□□□□□ -0.35
Gfra3O35118 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gfra3O35118 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gfra3O35118 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms