Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.97□□□□□ -0.49
Ndufb11O09111 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ndufb11O09111 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufb11O09111 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ndufb11O09111 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ndufb11O09111 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Ndufb11O09111 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ndufb11O09111 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.96□□□□□ -0.49
Ndufb11O09111 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ndufb11O09111 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.96□□□□□ -0.49
Ndufb11O09111 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.96□□□□□ -0.49
Ndufb11O09111 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufb11O09111 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.96□□□□□ -0.5
Ndufb11O09111 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufb11O09111 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.96□□□□□ -0.5
Ndufb11O09111 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.96□□□□□ -0.5
Ndufb11O09111 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufb11O09111 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufb11O09111 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ndufb11O09111 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufb11O09111 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufb11O09111 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufb11O09111 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndufb11O09111 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufb11O09111 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.94□□□□□ -0.5
Ndufb11O09111 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ndufb11O09111 Gm29707-201ENSMUST00000196325 491 ntBASIC11.94□□□□□ -0.5
Ndufb11O09111 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms