Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Ercc2O08811 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.26■□□□□ 0.03
Ercc2O08811 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ercc2O08811 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.26■□□□□ 0.03
Ercc2O08811 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.26■□□□□ 0.03
Ercc2O08811 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.26■□□□□ 0.03
Ercc2O08811 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.26■□□□□ 0.03
Ercc2O08811 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Ercc2O08811 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ercc2O08811 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Ercc2O08811 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.26■□□□□ 0.03
Ercc2O08811 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.26■□□□□ 0.03
Ercc2O08811 Gm10154-201ENSMUST00000084445 354 ntBASIC15.26■□□□□ 0.03
Ercc2O08811 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ercc2O08811 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ercc2O08811 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc2O08811 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.25■□□□□ 0.03
Ercc2O08811 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.25■□□□□ 0.03
Ercc2O08811 Gm15467-201ENSMUST00000120582 445 ntBASIC15.25■□□□□ 0.03
Ercc2O08811 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.25■□□□□ 0.03
Ercc2O08811 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.25■□□□□ 0.03
Ercc2O08811 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ercc2O08811 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ercc2O08811 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ercc2O08811 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.24■□□□□ 0.03
Ercc2O08811 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ercc2O08811 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.24■□□□□ 0.03
Ercc2O08811 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ercc2O08811 Gm27301-201ENSMUST00000184012 127 ntBASIC15.24■□□□□ 0.03
Ercc2O08811 Mir8117-201ENSMUST00000184773 107 ntBASIC15.24■□□□□ 0.03
Ercc2O08811 Gm44492-201ENSMUST00000197012 141 ntBASIC15.24■□□□□ 0.03
Ercc2O08811 Gm43514-201ENSMUST00000198852 424 ntBASIC15.24■□□□□ 0.03
Ercc2O08811 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ercc2O08811 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ercc2O08811 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ercc2O08811 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ercc2O08811 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc2O08811 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ercc2O08811 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ercc2O08811 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.23■□□□□ 0.03
Ercc2O08811 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms