Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Gm18624-201ENSMUST00000220966 658 ntBASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
B020004C17RikJ3QP07 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Gm12585-201ENSMUST00000117307 290 ntBASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Gm9726-201ENSMUST00000180321 678 ntBASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
B020004C17RikJ3QP07 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 App-207ENSMUST00000227737 2827 ntBASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 BC001981-202ENSMUST00000191393 1545 ntBASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
B020004C17RikJ3QP07 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Gm19220-201ENSMUST00000222682 803 ntBASIC16.53■□□□□ 0.24
B020004C17RikJ3QP07 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms