Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Olfr129-201ENSMUST00000122318 993 ntBASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Gm25745-201ENSMUST00000174945 133 ntBASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Mir3081-201ENSMUST00000175305 84 ntBASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Gm44454-201ENSMUST00000198541 138 ntBASIC13.63□□□□□ -0.23
Shisa8J3QNX5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shisa8J3QNX5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa8J3QNX5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm12008-201ENSMUST00000117791 755 ntBASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm7506-201ENSMUST00000207758 815 ntBASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa8J3QNX5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa8J3QNX5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms