Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh11xF6ZNL5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gm6736-201ENSMUST00000166583 948 ntBASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh11xF6ZNL5 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh11xF6ZNL5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh11xF6ZNL5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Pcdh11xF6ZNL5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh11xF6ZNL5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Pcdh11xF6ZNL5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh11xF6ZNL5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Gm27702-201ENSMUST00000184512 56 ntBASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdh11xF6ZNL5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh11xF6ZNL5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms