Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc149F6V035 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm6415-201ENSMUST00000118488 348 ntBASIC15.12■□□□□ 0.01
Ccdc149F6V035 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc149F6V035 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Gm8410-201ENSMUST00000117225 605 ntBASIC15.11■□□□□ 0.01
Ccdc149F6V035 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.11■□□□□ 0.01
Ccdc149F6V035 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc149F6V035 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.1■□□□□ 0.01
Ccdc149F6V035 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.1■□□□□ 0.01
Ccdc149F6V035 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.1■□□□□ 0.01
Ccdc149F6V035 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc149F6V035 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc149F6V035 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc149F6V035 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Prob1-201ENSMUST00000097619 3021 ntBASIC15.09■□□□□ 0.01
Ccdc149F6V035 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc149F6V035 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc149F6V035 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.09■□□□□ 0.01
Ccdc149F6V035 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms