Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm14701-201ENSMUST00000117156 348 ntBASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb9E9Q5G2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb9E9Q5G2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb9E9Q5G2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb9E9Q5G2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.52■□□□□ 0.39
Pcdhb9E9Q5G2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Sybu-209ENSMUST00000228639 4113 ntBASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Gm5312-201ENSMUST00000203728 547 ntBASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb9E9Q5G2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Gm5479-201ENSMUST00000160578 435 ntBASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Gm18737-201ENSMUST00000173594 937 ntBASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb9E9Q5G2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.49■□□□□ 0.39
Pcdhb9E9Q5G2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Gm25287-201ENSMUST00000103846 110 ntBASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Gm22918-201ENSMUST00000103855 110 ntBASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhb9E9Q5G2 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms