Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
ApobE9Q414 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.94□□□□□ -0.98
ApobE9Q414 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
ApobE9Q414 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC8.94□□□□□ -0.98
ApobE9Q414 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
ApobE9Q414 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC8.94□□□□□ -0.98
ApobE9Q414 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.94□□□□□ -0.98
ApobE9Q414 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 AA619741-201ENSMUST00000195095 646 ntBASIC8.94□□□□□ -0.98
ApobE9Q414 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC8.94□□□□□ -0.98
ApobE9Q414 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC8.94□□□□□ -0.98
ApobE9Q414 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ApobE9Q414 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.94□□□□□ -0.98
ApobE9Q414 Gm5354-201ENSMUST00000182417 973 ntBASIC8.94□□□□□ -0.98
ApobE9Q414 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC8.94□□□□□ -0.98
ApobE9Q414 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
ApobE9Q414 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
ApobE9Q414 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ApobE9Q414 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ApobE9Q414 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC8.94□□□□□ -0.98
ApobE9Q414 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC8.93□□□□□ -0.98
ApobE9Q414 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.93□□□□□ -0.98
ApobE9Q414 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
ApobE9Q414 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.93□□□□□ -0.98
ApobE9Q414 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.93□□□□□ -0.98
ApobE9Q414 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Gm18307-201ENSMUST00000206864 949 ntBASIC8.93□□□□□ -0.98
ApobE9Q414 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ApobE9Q414 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Prob1-201ENSMUST00000097619 3021 ntBASIC8.93□□□□□ -0.98
ApobE9Q414 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Gm9200-201ENSMUST00000118513 1354 ntBASIC8.93□□□□□ -0.98
ApobE9Q414 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Gm15460-201ENSMUST00000118147 391 ntBASIC8.93□□□□□ -0.98
ApobE9Q414 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
ApobE9Q414 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ApobE9Q414 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
ApobE9Q414 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ApobE9Q414 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ApobE9Q414 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ApobE9Q414 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms