Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm28043E0CXC2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gm8344-201ENSMUST00000119813 856 ntBASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Gm28043E0CXC2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Efs-202ENSMUST00000227037 2540 ntBASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm28043E0CXC2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm4535-201ENSMUST00000182274 558 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44357-201ENSMUST00000195897 142 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm19658-201ENSMUST00000196231 138 ntBASIC14.96□□□□□ -0.01
Gm28043E0CXC2 Gm44367-201ENSMUST00000196836 138 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms